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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs201897666 chr10:7865908 TAA/T 0.000104 468 16.23 15.9 15.3 KM Plot
THCA rs201936851 chr6:24465969 CT/C 0 484 16.6 14.78 8.88 KM Plot
THCA rs2019407 chr15:54226311 G/A 1.11E-16 488 15.65 17.63 11 KM Plot
THCA rs202076026 chr1:41644987 G/GC 2.8E-7 490 14.92 17.77 17.47 KM Plot
THCA rs202211023 chr7:76410967 A/G 2.74E-9 484 15.32 16.95 15.15 KM Plot
THCA rs202223790 chr10:104731019 GA/G 5.76E-7 468 15.9 16.9 16.37 KM Plot
THCA rs202223862 chr1:119114916 G/A 7.76E-7 489 16.07 15.93 14.57 KM Plot
THCA rs2024141 chr5:140765000 G/A 7.5E-7 488 15.9 15.87 21.33 KM Plot
THCA rs2024859 chr1:41562285 T/G 3.61E-12 489 17.7 17.73 14.93 KM Plot
THCA rs2024860 chr1:41562243 C/T 3.61E-12 489 17.7 17.75 14.93 KM Plot
THCA rs2029306 chr19:43597284 A/G 0.000238 485 15.33 18.03 10.08 KM Plot
THCA rs2031885 chr1:63654902 C/A 0.000111 474 15.08 15.9 19.13 KM Plot
THCA rs2033795 chr14:59748893 G/A 1.4E-8 488 16.38 12.62 5.45 KM Plot
THCA rs2037127 chr3:157597235 G/T 0.000243 468 16.02 14.87 33.02 KM Plot
THCA rs2040751 chr16:20827101 C/T 9.15E-5 490 16.37 14.67 17.65 KM Plot